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Hashtab v4.0.0 setup.zip
Hashtab v4.0.0 setup.zip







  1. HASHTAB V4.0.0 SETUP.ZIP INSTALL
  2. HASHTAB V4.0.0 SETUP.ZIP PATCH
  3. HASHTAB V4.0.0 SETUP.ZIP CODE
  4. HASHTAB V4.0.0 SETUP.ZIP DOWNLOAD

  • speed up OpenMPI 4.1.4 configure by not running -force, but only running required Autotools commands ( #15957).
  • stick to Java/11 as dependency for Bazel 5.1.1 (which is available for x86_64, aarch64, ppc64le) ( #15906).
  • synchronize ncurses easyconfigs using system toolchain ( #15903).
  • remove superfluous -DCMAKE_BUILD_TYPE=Release, use of build_type = Release, or enabling separate_build_dir from easyconfigs using CMakeMake easyblock ( #13384).
  • add direct Pango dependency in recent ImageMagick easyconfigs ( #16237).
  • remove incorrect comment for Boost dependency in OpenBabel 3.1.1 easyconfigs ( #16238).
  • fix checksum for CUDA 11.4.1 aarch64 installer ( #16234).
  • consistently add maeparser + CoordgenLibs dependencies to OpenBabel 3.1.1 easyconfigs ( #16231).
  • fix sources + source URL + homepage for Molekel v5.4.0 ( #16219).
  • HASHTAB V4.0.0 SETUP.ZIP INSTALL

  • remove modextrapaths to add top-level install directory to ``$PATH ``for recent InterProScan easyconfigs (now done by default by Binary easyblock) ( #16167).
  • replace HDF5 v1.13.1 with v1.12.1 as dependency, since we shouldn’t use odd minor versions of HDF5 which are not stable releases ( #16153).
  • add missing patches + enable running tests for AmberTools 21 with intel/2021a ( #16151) and intel/2021b ( #16152).
  • fix top level Makefile for AmberTools 20 and enable tests ( #16150).
  • fix libsanitzer for glibc 2.36 to build GCCcore 11.3.0 ( #16145).
  • fix checksum for Stacks v2.62 (due to silent re-release without version bump) ( #16134).
  • add missing BCFtools dependency for recent medaka versions ( #16107).
  • HASHTAB V4.0.0 SETUP.ZIP PATCH

  • add patch to fix pkgconfig file for Blitz++ v1.0.2 ( #16102).
  • use versioned symbols in ncurses built with system toolchain (by adding -with-versioned-syms configure option) ( #16064).
  • skip NASA performance and remote server tests in netCDF v4.9.0 ( #16050, #16158).
  • exclude failing test in TensorFlow 2.4.1 ( #16042).
  • add patch to fix missing sync in LINCS and SETTLE CUDA kernels for GROMACS 2020 ( #16027) and 2021 ( #16026).
  • add alternative checksum for plot3Drgl extension in R v4.1.x + v4.2.0 easyconfigs ( #16011).
  • restore ploteig in EIGENSOFT 7.2.1 ( #15996).
  • HASHTAB V4.0.0 SETUP.ZIP DOWNLOAD

  • explicitly download wannier90 source tarball from wannier90 GitHub repository in QuantumESPRESSO 7.1 easyconfigs ( #15993).
  • add missing SciPy-bundle dependency for rMATS-turbo ( #15988).
  • fix dependency on FOX Toolkit in SUMO ( #15986).
  • refactor checksum test for extensions to use collect_exts_file_info ( #15973).
  • add patch to fix broken test on POWER for numpy in SciPy-bundle 2022.05 ( #15968).
  • consistently add libffi + elfutils dependencies to recent Clang easyconfigs ( #15935, #16225).
  • exclude Binary, PackedBinary and JAR easyblocks from binutils build requirements ( #15932).
  • add and fix patches for PyTorch 1.9.0 on POWER ( #15919).
  • hashtab v4.0.0 setup.zip

    fix tests on POWER9 for BLIS 0.9.0 + fix auto-detect for POWER10 for BLIS (AMD) v2.0 + v3.0 ( #15889).work around miscompilation of OpenBLAS on POWER by compiling with -fstack-protector-strong ( #15885).exclude (flaky) fault_tolerance_test and fix non-x86 build for TensorFlow 2.7.1 ( #15882).add patch for AlphaFold v2.2.2 to fix NaN problem with jax 0.3.9 ( #15874).add missing dependencies and execute tests on Trycycler v0.5.2 ( #15864).use build environment set by EasyBuild and add missing dependency on zlib to minimap2 ( #15859).add CVE patch for XZ 5.2.5 + attempt to fix symbol patch for all OSs ( #15856).explicitly enable HDF5 from kallisto v0.46.2 onwards ( #15843).

    hashtab v4.0.0 setup.zip

  • downgrade SPAdes dependency to v3.13.1 for Unicycler 0.4.9 since v3.15.3 is too new ( #15840).
  • add patch for BLIS to fix auto-detection of POWER ( #15826).
  • add Autotools build dependency to R 4.2.0 w/ foss 2021b ( #15822).
  • fix set-alias statements for MaxQuant v2.0.3.0 ( #15743).
  • use correct Matlab Runtime Compiler (v8.4) for FreeSurfer v7.1.1 ( #13375).
  • HASHTAB V4.0.0 SETUP.ZIP CODE

    fix code style issues reported by recent flake8 linter ( #4049).add script to find dependencies of Python packages ( #3839).









    Hashtab v4.0.0 setup.zip